- Feb 18, 2020
- Oct 09, 2019
- Sep 27, 2019
- Sep 26, 2019
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cmaffeo2 authored
Added test to check that model_from_basepair_stack_3prime works with circular ssDNA; removed warnings and made function work with lists instead of numpy arrays
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cmaffeo2 authored
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cmaffeo2 authored
Fixed polygon_mesh reader so that it works with user-generated .ma files, not just autogenerated ones
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cmaffeo2 authored
find_stacks routine moved to segmentmodel_from_lists using only coordinates and transforms; generate stacks automatically if None kept old find_stacks routine in segmentmodel_from_pdb as find_stacks_mdanalysis
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cmaffeo2 authored
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cmaffeo2 authored
1) Passthrough of mrdna.segmentmodel arguments 2) Improved input validation 3) Stacks are removed unless stack[bp[stack]] == stack 4) Cleaner code for assigning ends of terminally-connected "segments"
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- Sep 25, 2019
- Sep 05, 2019
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cmaffeo2 authored
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- Sep 04, 2019
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cmaffeo2 authored
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- Aug 27, 2019
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cmaffeo2 authored
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- Aug 20, 2019
- Aug 13, 2019