Increased default oxDNA minimization to 500 steps

mrdna/simulate.py

@@ -10,7 +10,7 @@ from . import get_resource_path
 def minimize_and_simulate_oxdna( model, 
                                  output_name,
                                  directory = None,
-                                 num_min_steps = 1e2,
+                                 num_min_steps = 5e2,
                                  num_steps = 1e7,
                                  output_period = None,
                                  **oxdna_args