- Sep 04, 2018
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cmaffeo2 authored
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- Aug 28, 2018
- Aug 24, 2018
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cmaffeo2 authored
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- Aug 21, 2018
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cmaffeo2 authored
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- Aug 20, 2018
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cmaffeo2 authored
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- Aug 17, 2018
- Aug 13, 2018
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cmaffeo2 authored
Made bond potentials longer ranged (120 vs 50 nm), and removed unneeded 'continue' statement that was attempting to prevent double-counting when placing initial beads
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- Jul 23, 2018
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cmaffeo2 authored
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- Jul 20, 2018
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cmaffeo2 authored
Fixed spring constant for dihedral that spans crossovers, keeping helices parallel (note this differs from prototyped web service where 90 degree angle potentials were used) Changed dna bead type clustering to have higher resolution Streamlined some small parts of the code
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- Jul 18, 2018
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cmaffeo2 authored
Made intrahelical connections remove any existing connections; important for intrahelical "crossovers"
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- Jul 17, 2018
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cmaffeo2 authored
Added function for setting splines; converted an assertion into a warning when beads are very close; fiex crash when helices lack crossovers
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- Jul 16, 2018
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cmaffeo2 authored
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- Jul 13, 2018
- Jul 10, 2018
- Jul 06, 2018
- Jul 03, 2018
- Jun 28, 2018
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cmaffeo2 authored
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- Jun 14, 2018