Commit 5b0294b3 authored by cmaffeo2's avatar cmaffeo2
Browse files

Removed some unneccesary warnings

parent 88a43288
......@@ -1010,17 +1010,17 @@ class SingleStrandedSegment(Segment):
seg2 = other.container
end1 = self.end3
end2 = other
# assert( other.type_ == "end5" )
if (other.type_ is not "end5"):
print("WARNING: code does not prevent connecting 3prime to 3prime, etc")
assert(other.type_ != "end3")
# if (other.type_ is not "end5"):
# print("WARNING: code does not prevent connecting 3prime to 3prime, etc")
else:
seg1 = other.container
seg2 = self
end1 = other
end2 = self.start
# assert( other.type_ == "end3" )
if (other.type_ is not "end3"):
print("WARNING: code does not prevent connecting 3prime to 3prime, etc")
assert(other.type_ != "end5")
# if (other.type_ is not "end3"):
# print("WARNING: code does not prevent connecting 3prime to 3prime, etc")
## Remove other connections involving these points
if end1.connection is not None:
......@@ -1840,7 +1840,8 @@ class SegmentModel(ArbdModel):
for b1,b2 in intra_beads:
# assert( not np.isclose( np.linalg.norm(b1.collapsedPosition() - b2.collapsedPosition()), 0 ) )
if np.linalg.norm(b1.collapsedPosition() - b2.collapsedPosition()) < 1:
print("WARNING: some beads are very close")
# print("WARNING: some beads are very close")
...
parent = self._getParent(b1,b2)
......
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