Skip to content
Snippets Groups Projects
Commit 5abfe0de authored by pinyili2's avatar pinyili2
Browse files

add

parent bf27f34c
No related branches found
No related tags found
1 merge request!1Pinyili2
...@@ -234,7 +234,7 @@ def model_from_basepair_stack_3prime(coordinate, basepair, stack, three_prime, ...@@ -234,7 +234,7 @@ def model_from_basepair_stack_3prime(coordinate, basepair, stack, three_prime,
max_basepairs_per_bead = 5, max_basepairs_per_bead = 5,
max_nucleotides_per_bead = 5, max_nucleotides_per_bead = 5,
local_twist = False, local_twist = False,
dimensions=(5000,5000,5000) dimensions=(5000,5000,5000),
**model_parameters): **model_parameters):
""" """
Creates a SegmentModel object from lists of each nucleotide's Creates a SegmentModel object from lists of each nucleotide's
...@@ -486,7 +486,7 @@ def model_from_pandas(df,coordinate_col="r",bp_col="bp",stack_col="stack",three_ ...@@ -486,7 +486,7 @@ def model_from_pandas(df,coordinate_col="r",bp_col="bp",stack_col="stack",three_
max_nucleotides_per_bead = 5, max_nucleotides_per_bead = 5,
local_twist = False, local_twist = False,
dimensions=(5000,5000,5000) dimensions=(5000,5000,5000)
**model_parameters): ,**model_parameters):
try: try:
c=df[coordinate_col] c=df[coordinate_col]
except: except:
...@@ -527,7 +527,7 @@ def model_from_pandas(df,coordinate_col="r",bp_col="bp",stack_col="stack",three_ ...@@ -527,7 +527,7 @@ def model_from_pandas(df,coordinate_col="r",bp_col="bp",stack_col="stack",three_
max_basepairs_per_bead = max_basepairs_per_bead, max_basepairs_per_bead = max_basepairs_per_bead,
max_nucleotides_per_bead =max_nucleotides_per_bead , max_nucleotides_per_bead =max_nucleotides_per_bead ,
local_twist = local_twist, local_twist = local_twist,
dimensions=dimensions dimensions=dimensions,
**model_parameters) **model_parameters)
return model return model
except: except:
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment