Commit 0befffbe authored by cmaffeo2's avatar cmaffeo2
Browse files

Fixed oxDNA topology for circular strands; increased default max_backbone_force

parent c37732c5
......@@ -3626,7 +3626,7 @@ E = 0 0 0
idx = 0
sidx = 1
for strand in strands:
prev = idx+len(strand.num_nt) if strand.is_circular else -1
prev = idx+strand.num_nt-1 if strand.is_circular else -1
last = idx if strand.is_circular else -1
## Traverse 3'-to-5'
......@@ -3666,7 +3666,7 @@ E = 0 0 0
delta_translation = 0.22,
delta_rotation = 0.22,
verlet_skin = 0.5,
max_backbone_force = 5,
max_backbone_force = 100,
):
if seed is None:
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment