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Commit 80d59148 authored by cmaffeo2's avatar cmaffeo2
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Better placement of ends for cadnano_segments, especially for 1nt/1bp segments

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mrdna/readers/cadnano_segments.py
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...@@ -306,8 +306,8 @@ class cadnano_part(SegmentModel): ...@@ -306,8 +306,8 @@ class cadnano_part(SegmentModel):
# "H%03d" % hid # "H%03d" % hid
kwargs = dict(name=name, segname=name, occupancy=hid) kwargs = dict(name=name, segname=name, occupancy=hid)
posargs1 = dict( start_position = self._get_cadnano_position(hid,zid1), posargs1 = dict( start_position = self._get_cadnano_position(hid,zid1-0.25),
end_position = self._get_cadnano_position(hid,zid2) ) end_position = self._get_cadnano_position(hid,zid2+0.25) )
posargs2 = dict( start_position = posargs1['end_position'], posargs2 = dict( start_position = posargs1['end_position'],
end_position = posargs1['start_position']) end_position = posargs1['start_position'])
......
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