Updated interhelical bond exclusions to be consistent with ENRG MD server; no...

Updated interhelical bond exclusions to be consistent with ENRG MD server; no bonds within 10 angstroms of crossover

atomicModel.py

@@ -1155,7 +1155,7 @@ class atomicModel():
 
                 if self.latticeType == 'honeycomb':
                     # minDist = 8 # TODO: test against server
-                    minDist = 8 # TODO: test against server
+                    minDist = 11 # Matches ENRG MD server... should it?
                 elif self.latticeType == 'square':
                     minDist = 11