Brownian dynamics (BD) simulation is method for studying biomolecules, ions, and
nanomaterials that balances detail with computational efficiency.
ARBD supports tabulated non-bonded and bonded interactions between BD particles
that can also be influenced by grid-specified potentials. Uniquely, ARBD also allows grid-specified densities and potentials to be associated with rigid body particles that rotate and translate to represent larger molecules. Most importantly,
ARBD supports tabulated non-bonded and bonded interactions between BD
particles that can also be influenced by grid-specified
potentials. Uniquely, ARBD also allows grid-specified densities and
potentials to be associated with rigid body particles that rotate and
translate to represent larger molecules. Most importantly, the code is
designed to run quickly on modern NVIDIA GPUs.
Please be aware that ARBD is being actively developed, is offered as alpha
software (bugs may be present) and is offered without warranty.
software without warranty. Expect to run into the occasional bug.
