changes to make needed to compile

DcdWriter.h

@@ -14,9 +14,8 @@
   output, so its pretty ugly.  If you are squeamish, don't look!
 */
 
-
-#ifndef DCDWRITER_H
-#define DCDWRITER_H
+#pragma once
+#include <unistd.h>
 #include <cstring>
 #include <fstream>
 #include <fcntl.h>
@@ -324,4 +323,4 @@ public:
     return(0);
   }
 };
-#endif
+

makefile

 ### Paths, libraries, includes, options
 
 # CUDA_PATH ?= /Developer/NVIDIA/CUDA-6.5
-CUDA_PATH ?= /software/cuda-toolkit-6.5-x86_64
+# CUDA_PATH ?= /software/cuda-toolkit-6.5-x86_64
+CUDA_PATH ?= /usr/local/cuda-7.0
 
 #CUDA_PATH ?= /usr/local/encap/cuda-5.5
 

nvcc.sh

 #!/bin/bash
 # Usage: source nvcc.sh
 
-module load cuda-toolkit
+# module load cuda-toolkit
 # /software/cuda-toolkit-4.1-x86_64/cuda/bin/nvcc
 
 # Add CUDA 'bin' folder to PATH