From 93b5c9da20a6935cdf24e387e8f3da91cd534713 Mon Sep 17 00:00:00 2001
From: Chris Maffeo <cmaffeo2@illinois.edu>
Date: Tue, 13 Aug 2019 15:21:55 -0500
Subject: [PATCH] Pass MDAnalysis str() obj instead of Path for PDB reader
---
mrdna/readers/segmentmodel_from_pdb.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/mrdna/readers/segmentmodel_from_pdb.py b/mrdna/readers/segmentmodel_from_pdb.py
index 70032d2..439958a 100644
--- a/mrdna/readers/segmentmodel_from_pdb.py
+++ b/mrdna/readers/segmentmodel_from_pdb.py
@@ -29,7 +29,7 @@ bases = resnames.keys()
resname_to_key = {n:k for k,v in resnames.items() for n in v.split()}
complement = dict(A='T', C='G', T='A', G='C')
-refUnis = {b:mda.Universe(get_resource_path("generate-nts/1-w3dna/{}{}.pdb".format(b,complement[b])))
+refUnis = {b:mda.Universe(str(get_resource_path("generate-nts/1-w3dna/{}{}.pdb".format(b,complement[b]))))
for b in bases}
stack_text = "not name O5' P O1P O2P OP1 OP2 O3' 1H* 2H* 3H* 0H* H*"
--
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