diff --git a/dnarbd/readers/cadnano_segments.py b/dnarbd/readers/cadnano_segments.py index a70f7d7a3df227080dbd230887e15d4cb22d0ade..fde1d8faaf7ed0ef0f33b0e3d7e8c54946075b4a 100644 --- a/dnarbd/readers/cadnano_segments.py +++ b/dnarbd/readers/cadnano_segments.py @@ -209,7 +209,11 @@ class cadnano_part(SegmentModel): # TODO add code to encode Parts with ARBITRARY point configurations raise NotImplementedError("Not implemented") else: - vh_props, origins = part.helixPropertiesAndOrigins() + try: + vh_props, origins = part.helixPropertiesAndOrigins() + except: + origins = {hid:part.getVirtualHelixOrigin(hid)[:2] for hid in part.getidNums()} + self.origins = origins vh_list = []