From 0087a6d29433abcdd4c39f26451e2fca196ddad2 Mon Sep 17 00:00:00 2001
From: David Winogradoff <dwinogra@illinois.edu>
Date: Tue, 18 Sep 2018 13:19:10 -0500
Subject: [PATCH] edit draw cylinders function
---
mrdna/segmentmodel.py | 13 +++++++++++++
1 file changed, 13 insertions(+)
diff --git a/mrdna/segmentmodel.py b/mrdna/segmentmodel.py
index fd78e54..650e5a5 100644
--- a/mrdna/segmentmodel.py
+++ b/mrdna/segmentmodel.py
@@ -2835,3 +2835,16 @@ proc calcforces {} {
## material
tclFile.write("graphics top materials on \n")
tclFile.write("graphics top material AOEdgy \n")
+
+ ## iterate through the model segments
+ for s in self.segments:
+ if isinstance(s,DoubleStrandedSegment):
+ print("## dsDNA! \n")
+ draw_cylinder(s,10,"cyan")
+ elif isinstance(s,SingleStrandedSegment):
+ print("## ssDNA! \n")
+ draw_cylinder(s,3,"orange")
+ else:
+ raise Exception ("your model includes beads that are neither ssDNA nor dsDNA")
+ ## tclFile complete
+ tclFile.close()
--
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