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Chris Maffeo's avatar
Fixed bugs in initialization of Exclusions and in the calculation of forces...
cmaffeo2 authored 
Fixed bugs in initialization of Exclusions and in the calculation of forces due to angle potentials . Added coordinate file for RBs. Added normalization of orientation in RB integrator.
192408a5
History
Chris Maffeo's avatar 192408a5
History
Name Last commit Last update
.gitignore
Angle.cu
Angle.h
BaseGrid.cu
BaseGrid.h
BrownianParticle.cu
BrownianParticle.h
BrownianParticleType.cpp
BrownianParticleType.h
CellDecomposition.cu
CellDecomposition.h
ComputeForce.cu
ComputeForce.cuh
ComputeForce.h
ComputeGridGrid.cu
ComputeGridGrid.cuh
ComputeJustForce.h
Configuration.cpp
Configuration.h
CudaUtil.cu
CudaUtil.cuh
DcdWriter.h
Debug.h
Dihedral.cu
Dihedral.h
Exclude.cu
Exclude.h
FlowForce.cpp
FlowForce.h
GPUController.h
GPUManager.cpp
GPUManager.h
GrandBrownTown.cu
GrandBrownTown.cuh
GrandBrownTown.h
JamesBond.cu
JamesBond.h
OverlordGrid.h
Random.h
RandomCPU.h
RandomCUDA.cu
RandomCUDA.h
RandomGsl.h
Reader.h
Reservoir.cu
Reservoir.h
RigidBody.cu
RigidBody.h
RigidBodyController.cu
RigidBodyController.h
RigidBodyGrid.cu
RigidBodyGrid.h
RigidBodyType.cu
RigidBodyType.h
Scatter.cpp
Scatter.h
TabulatedAngle.cu
TabulatedAngle.h
TabulatedDihedral.cu
TabulatedDihedral.h
TabulatedMethods.cuh
TabulatedPotential.cu
TabulatedPotential.h
TrajectoryWriter.h
common.h
findcudalib.mk
gridSampleDef.c
gridSampleFlow.c
imd.c
imd.h
makefile
makefile.clang
notes.org
nvcc.sh
read_link.sh
runBrownTown.cpp
useful.cu
useful.h
util.cpp
util.h
vmdsock.c
vmdsock.h